Insertion junction: CLIP2.030567_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030567
Chromosome:chromosome 16
Location:6767712
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672450 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCGACAAAGGTAATGGGCCATGGTGCAGTGTGAAAGGGCAGGCAGGGC
Internal bar code:GGGGCCGCGTTCTGTCTGTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2239
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCCTGCAATCCTATCGC
Suggested primer 2:TGGTGTACGGCTGCTTACTG