Insertion junction: CLIP2.030571_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.030571
Chromosome:chromosome 3
Location:7310906
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206950 (1 of 1) PF05183 - RNA dependent RNA polymerase (RdRP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGGCGCAGCGGCGCCGGTGGGCAGCAGTATTCACACCAATAATGGAG
Internal bar code:TTTATCTTGATCTCGTACAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2228
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTACTGGTAGGAGTCGGT
Suggested primer 2:ATACCTGGGCAGCTGTTGTC