Insertion junction: CLIP2.030571_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030571
Chromosome:chromosome 3
Location:7310937
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206950 (1 of 1) PF05183 - RNA dependent RNA polymerase (RdRP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCGGTGACGCACAGGCCGCTGCGCCGCGCTGGTGGGGGGTGGGGCCA
Internal bar code:TTTATCTTGATCTCGTACAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2401
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ATACCTGGGCAGCTGTTGTC
Suggested primer 2:GGGTACTGGTAGGAGTCGGT