Insertion junction: CLIP2.030572_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030572
Chromosome:chromosome 2
Location:3892049
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g101600 (1 of 3) PF11735 - Cryptococcal mannosyltransferase 1 (CAP59_mtransfer) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAACCCTGCACCCACCCATGCACCCCCGCAGTTTGACAAGCGGCCGCCC
Internal bar code:AACAAATAGCAATCGATGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4650
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCGGTAGTGTTTTGTGTG
Suggested primer 2:CTGCTCTTCCTGAACGACGT