Insertion junction: CLIP2.030580_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030580
Chromosome:chromosome 4
Location:2766653
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g223650 FAP30 (1 of 1) PF02494 - HYR domain (HYR); Flagellar Associated Protein 30 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACCGGCAACTACCAGCTTGAAGGTAAACACCTGATCCTTCGCCAGGAT
Internal bar code:CGTTCCACCTAGTGGGTGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2465
LEAP-Seq percent confirming:86.3636
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AATATTACACACGCACGCGC
Suggested primer 2:CGTATGATAAGCGGTGGCCT