Insertion junction: CLIP2.030586_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030586
Chromosome:chromosome 1
Location:3693404
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023950 (1 of 11) PF13229 - Right handed beta helix region (Beta_helix) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCCGCCCAACCAGCATCCCAGCAACAATGACCGGCGGCACGGGCAC
Internal bar code:TAGTGATGGAACCCAGAGTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1330
LEAP-Seq percent confirming:26.3158
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGTATGACCTGACGCTGCTG
Suggested primer 2:GCATTGACGCCTCGTTCATC