Insertion junction: CLIP2.030592_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030592
Chromosome:chromosome 17
Location:3915537
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727850 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGATCCATCGGCTGCTGGTCGTACAACTCCTGCTCGTACTGCCATTCG
Internal bar code:GTTGATTCCCAACAGCAATCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1147
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGACTCGTATGTGGACGC
Suggested primer 2:TTCTGCTGTGGGTCATCGAC