Insertion junction: CLIP2.030594_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030594
Chromosome:chromosome 10
Location:5757890
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g459900 PFH4,PHX16,P4H4 Prolyl 4-hydroxylase 4; (1 of 5) PTHR10869//PTHR10869:SF55 - PROLYL 4-HYDROXYLASE ALPHA SUBUNIT // OXOGLUTARATE/IRON-DEPENDENT OXYGENASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAACCCAAAGCAAGCCAACCGATTGGGGGTTGCAAGGATTGGTACAGAG
Internal bar code:AATCTTCGCTACCGGTGAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2168
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCACGAGGGCAACAGATA
Suggested primer 2:CTGGTTTGATTTGGGCAGCC