Insertion junction: CLIP2.030595_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030595
Chromosome:chromosome 6
Location:3829140
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278177 DNL6,LIG6 (1 of 1) PTHR10459:SF44 - ANKYRIN REPEAT-CONTAINING PROTEIN; DNA ligase 6 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGGTACTGTTGGCGGCGGCTGCGCCGCCGTCGCCGCAGTGCGCCGG
Internal bar code:TGTATCGCATTAGTCACTGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4293
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTACCTGATACACCCGGT
Suggested primer 2:ACATCGGTAACAACGCGTCT