Insertion junction: CLIP2.030597_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030597
Chromosome:chromosome 12
Location:243392
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485150 GAP1a,GAP1,GAPC1 (1 of 2) 1.2.1.12 - Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) / Triosephosphate dehydrogenase; Glyceraldehyde 3-phosphate dehydrogenase, GAPC, chloroplastic CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCCATGTATTCGGCATCAATGAATGGGTCGTTGATCGCCACGACCTC
Internal bar code:TTGTGTTTTAGAAAGAAATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4125
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCCAAACTACTCCTGTGT
Suggested primer 2:GAGTAGCGTCGTCGTGCATA