Insertion junction: CLIP2.030601_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030601
Chromosome:chromosome 9
Location:2416213
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393650 (1 of 1) PF00069//PF01590 - Protein kinase domain (Pkinase) // GAF domain (GAF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCATCGAGCAGGGTGGGCGTTTGGCAGGGTGGGCATGCGCGTGCGCGTG
Internal bar code:TATCTAAGGCAGTACTCTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2921
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTTTCAAAGCCCCTCCT
Suggested primer 2:TGGTGTGTGATGTACCGTGG