Insertion junction: CLIP2.030604_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030604
Chromosome:chromosome 4
Location:3991351
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g232104 LHCBM3 (1 of 6) K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1); Light-harvesting complex II chlorophyll a/b binding protein M3 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTGTGCAAGCTAGGGTCGCACATCGCTTAGCGAAACAACTCACGTCA
Internal bar code:GGTGGCCATGCACCAGGAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2337
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGGGCCGTAGAACTCAA
Suggested primer 2:AACCAGCAGCTTTGCCAATG