Insertion junction: CLIP2.030608_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030608
Chromosome:chromosome 13
Location:3386136
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586700 FXL2 FixL-like PAS domain protein; (1 of 12) 2.7.13.3 - Histidine kinase / Protein kinase (histidine) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTAGTCGGCAACTTGCCGGCCGGGCAGCTGTCAGGCGGGCTGGCTCCTA
Internal bar code:CTGTATAACCCAGTCTGTGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1695
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCTTTCGCTAATGACGTG
Suggested primer 2:AACTCCAAGGGCCACAACAA