Insertion junction: CLIP2.030608_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030608
Chromosome:chromosome 13
Location:3386160
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586700 FXL2 FixL-like PAS domain protein; (1 of 12) 2.7.13.3 - Histidine kinase / Protein kinase (histidine) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGTGGCGGCTGCTGGTGAGCCTCCAGCGCCCCGCTGGTCTTGTTGGT
Internal bar code:CTGTATAACCCAGTCTGTGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3893
LEAP-Seq percent confirming:63.0631
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:111

Suggested primers for confirmation by PCR

Suggested primer 1:AACTCCAAGGGCCACAACAA
Suggested primer 2:CGCCTTTCGCTAATGACGTG