Insertion junction: CLIP2.030610_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030610
Chromosome:chromosome 2
Location:2851812
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094700 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTATACCATCCATTTTAGGTTGGTAGCTGTAGAGCCCGCACAGCCGAT
Internal bar code:CTATCTCCGTCATGGTTTTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1116
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGTGCACCATGATGATC
Suggested primer 2:TGTACTGTACACACACGCCC