Insertion junction: CLIP2.030617_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030617
Chromosome:chromosome 3
Location:2957814
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162950 CCDC81 Coiled coil domain containing protein 81; (1 of 1) PTHR14362:SF2 - COILED-COIL DOMAIN-CONTAINING PROTEIN 81 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGAGCTGCTAAGGACCGAGCCGGGCATAACCGCAGACCGCACCTGTGG
Internal bar code:GGGACGTCAAAATGGCGAGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1624
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GTTACCAGCAGGGCTACCAG
Suggested primer 2:TATGCGCAGGTGCTGGTAAA