Insertion junction: CLIP2.030618_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030618
Chromosome:chromosome 7
Location:5651765
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g352500 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGGCCGAAGAACGCCGACTGCATGGGGTGCAGGACCGAGGCAGAGCC
Internal bar code:TCGTACGATTCCAGTTACCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1690
LEAP-Seq percent confirming:89.3617
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCTCCAAGCTCTCACCCG
Suggested primer 2:TTGTGTCCATCAGGCTCACC