Insertion junction: CLIP2.030620_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030620
Chromosome:chromosome 3
Location:6394201
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192600 THK1 (1 of 1) 2.7.1.21 - Thymidine kinase; Thymidine kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTATGGCTCCCTTGCCACGGTGCCTTGTGTCTCACATACCACCCCTCCC
Internal bar code:GTGATTTCTGTCTTTCTACACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2359
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGGTCTACAAGGCACAC
Suggested primer 2:GCACTTCTGTTCCTCTCCCC