Insertion junction: CLIP2.030620_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030620
Chromosome:chromosome 3
Location:6394203
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192600 THK1 (1 of 1) 2.7.1.21 - Thymidine kinase; Thymidine kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTTACAGCGAGCGCTAGTAAGGGAGGCAGCAGACAGTCACTAGTTGA
Internal bar code:CGATCATAACAGTAGCAAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4547
LEAP-Seq percent confirming:77.6119
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTTCTGTTCCTCTCCCC
Suggested primer 2:TCACGGTCTACAAGGCACAC