Insertion junction: CLIP2.030625_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.030625
Chromosome:chromosome 3
Location:4240938
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173900 (1 of 5) IPR001841//IPR013083 - Zinc finger, RING-type // Zinc finger, RING/FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCAGACGACGGCCACCATCCGCAACCAGGTCAACCTGAAGAAGCAGA
Internal bar code:TGACCTGCAGATTTTATCATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:490
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAACTTGTGGTTGAGCTGCG
Suggested primer 2:AAGCAGACCCGAAACGTCAT