Insertion junction: CLIP2.030628_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030628
Chromosome:chromosome 8
Location:526858
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g359500 (1 of 1) 6.3.2.4 - D-alanine--D-alanine ligase / D-alanylalanine synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGAGCGACACAGGCGGAATGGGGCGCAGATGGGTGGTCGTCGGCATG
Internal bar code:GCTTATATACCGGAATATGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1073
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCCCCACCAACACACACA
Suggested primer 2:GCCGAGACCATACTTACCCG