Insertion junction: CLIP2.030630_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030630
Chromosome:chromosome 3
Location:1747280
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g153500 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCTGGCCAACGTGGCCGCAGACAAGCTGAACGCGGCTGTGGACAAGG
Internal bar code:AAGACGATGGTCATTAGTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1707
LEAP-Seq percent confirming:91.1765
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GACTCCAGTCACTCCAAGCC
Suggested primer 2:GAACCGGAGACCAGGTGAAG