Insertion junction: CLIP2.030632_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030632
Chromosome:chromosome 8
Location:1566958
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g365450 (1 of 17) IPR001305 - Heat shock protein DnaJ, cysteine-rich domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCGGGGGCCATGCGGGGCGGGTGCAACCGTACCCCTACCCTACGTTG
Internal bar code:AGAGCTCAGCCTCGGTGTGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2272
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TACGTCGACCTTATGCGCTC
Suggested primer 2:AACCCCTCCCCTCCTAATCC