Insertion junction: CLIP2.030637_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030637
Chromosome:chromosome 13
Location:2924025
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583500 TAF2,GEX2 (1 of 5) IPR000104//IPR016024 - Antifreeze protein, type I // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACCAATTGAGATTTAAGGAGAAGCAGAGATAGGAGCGGAGTGGGTGG
Internal bar code:GCCCGCGATTGGTGAAGTGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2933
LEAP-Seq percent confirming:55.4054
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCGATGGTCACAAGACG
Suggested primer 2:GAGGCGAGGAAATGAACCCA