Insertion junction: CLIP2.030640_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030640
Chromosome:chromosome 3
Location:1796305
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154000 ABCA1A,ABCA1 (1 of 173) IPR029058 - Alpha/Beta hydrolase fold; ABC transporter 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATATTTACGCGCAGACCCACTGGTCGGCTTGGCCAATCAACGCGAGCGC
Internal bar code:GATTGGCCGTTTGTCTCATGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1228
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAAGATGACAGGCCTCAT
Suggested primer 2:ACATTCAGCAGCGACCAGAA