Insertion junction: CLIP2.030643_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030643
Chromosome:chromosome 10
Location:3105540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441500 (1 of 1) K09602 - ubiquitin thioesterase protein OTUB1 [EC:3.4.19.12] (OTUB1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTCAGAGCGCGAGCGGGTGGGGTGAGGGGTGTGCGGGGCGGCAACCC
Internal bar code:ATCGAAGAAGTGCACCCGTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:234
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGAGCAAAGGTTGGGGTT
Suggested primer 2:AATGACACGCAGCACCAAAC