Insertion junction: CLIP2.030644_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030644
Chromosome:chromosome 5
Location:1204962
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241631 (1 of 1) IPR000253//IPR002893 - Forkhead-associated (FHA) domain // Zinc finger, MYND-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAGTTTCCGACAGCGGCGTCGGCGGCCGCAGCGCCAGTAGCAGCCGCG
Internal bar code:CTGCGATACAGGTGTGACTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1643
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AAATCCTGGCGGTGTACTGG
Suggested primer 2:CTGTTGCTGTTGCTGTTGCT