Insertion junction: CLIP2.030651_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030651
Chromosome:chromosome 16
Location:7694791
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686173 (1 of 1) PTHR11071:SF276 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACTAAACCGATCCAAGCCAAACTAGCGGAGCACAGGCAGAGGCGACA
Internal bar code:CCCCGATTGCACTGTTTTTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3195
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GACAAGACGGCTACACCCAA
Suggested primer 2:TGCCGCATGATGATACCGAA