Insertion junction: CLIP2.030654_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030654
Chromosome:chromosome 13
Location:2070584
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576950 (1 of 2) PTHR13690//PTHR13690:SF71 - FAMILY NOT NAMED // PROTEIN C37C3.9 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCAGGATCCCCCCGGGCGCCACCCACCTGTCTGTGCGGTTGAACACGG
Internal bar code:CTTGGGAACAGATGTTCATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1760
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGATGTATGATGCCGGGA
Suggested primer 2:TGCTTTCCTGTGCACGAGAT