Insertion junction: CLIP2.030660_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.030660
Chromosome:chromosome 2
Location:4182100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g104100 (1 of 1) PTHR10209//PTHR10209:SF216 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN // 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCGAGGACGTCCGCCGGCGGTACGAGGACCAGGAGAGCCATTACAGTG
Internal bar code:AGGTAAGACGGTTTCTTCCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3577
LEAP-Seq percent confirming:98.0769
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGCGGGTTGGCGTAGTAG
Suggested primer 2:AGCCCCAGTCGTTTCAAGAG