Insertion junction: CLIP2.030665_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.030665
Chromosome:chromosome 7
Location:2313844
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327950 MAW9 Membrane-associated hydroxyproline-rich glycoprotein 9 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGCAAATCTGTGCCTTGCGTACGGTACGCACCCTGTCCTCACTTTCG
Internal bar code:AGATTTCAGAGAGGTTCTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1081
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:AAACACCACGGTCAGGAAGG
Suggested primer 2:GTGCAGGTCATTCTGGAGCT