Insertion junction: CLIP2.030676_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030676
Chromosome:chromosome 1
Location:4847596
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g033700 (1 of 1) PF01933 - Uncharacterised protein family UPF0052 (UPF0052) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAAGGCGTGGCCAGGAACAGTAGTATAGCAGGCGCGTTGTTGCCGATG
Internal bar code:TCGCAACGTCGGCGAATCTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:506
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGAGAGTGTGTGTGTGCG
Suggested primer 2:CCTGTCTTGTGCTGTTGTGC