Insertion junction: CLIP2.030687_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030687
Chromosome:chromosome 7
Location:6359251
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g357350 GLB1,PII Nitrogen regulatory protein PII; (1 of 1) PTHR30115:SF11 - NITROGEN REGULATORY PROTEIN P-II HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTAGTAGTGTGTATGAGTAAGAGAGGGATATGAAGGGCATGCGTGGCT
Internal bar code:GCTTGACGAAATAGACTAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:264
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCACTCCCGTTTACACA
Suggested primer 2:CCGTACTTGGACAGGGTGTC