Insertion junction: CLIP2.030689_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030689
Chromosome:chromosome 13
Location:3216077
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801548 (1 of 1) PF10613 - Ligated ion channel L-glutamate- and glycine-binding site (Lig_chan-Glu_bd) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCAATGCAAAAGGGGGCGCAACACATGAGCACACTCAGACCCGGCTCA
Internal bar code:CTTGCGGTTTCTAGCAAGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:385
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAATCCCGCCCACTAAGT
Suggested primer 2:GGGAGGGAGGGGGATTATGT