Insertion junction: CLIP2.030691_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.030691
Chromosome:chromosome 3
Location:6579043
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194600 (1 of 2) IPR000719//IPR011009//IPR013221 - Protein kinase domain // Protein kinase-like domain // Mur ligase, central intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGACTGACCCGCATGTCAGCCCGGCCCAGGCCGGAACGTAAACAAGCC
Internal bar code:TAGGCCTTGCGGTTTCTCGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2256
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCCAATTGTCCGCAATAG
Suggested primer 2:GCAGATCCACCTCCATCTGG