Insertion junction: CLIP2.030701_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030701
Chromosome:chromosome 17
Location:473888
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699000 PAT1 Phosphate acetyltransferase; (1 of 2) 2.3.1.8 - Phosphate acetyltransferase / Phosphotransacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCCCAGGGGCTGAGACGCGGGAGAGGTTGTGGGGGTGTTGTTGTAAG
Internal bar code:AGGGCACTGTGGGGATCTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:918
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CACCAGCATGTCCACGTACT
Suggested primer 2:CCCCCTGGTGCTTTCCTAAG