Insertion junction: CLIP2.030706_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030706
Chromosome:chromosome 6
Location:7516138
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g301100 (1 of 5) PF04232 - Stage V sporulation protein S (SpoVS) (SpoVS) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTCTGCAAAATTACACCCCTGTCGCTAATGTGTCCCCCCTTGACGGC
Internal bar code:AAGATGAGGTTGGGCTAATCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:257
LEAP-Seq percent confirming:5.26316
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTTTCCGTGTACACCGGG
Suggested primer 2:TTGGGCTGCTGGTGTACAAA