Insertion junction: CLIP2.030708_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030708
Chromosome:chromosome 3
Location:7497147
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205550 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGACCCCTTCCCCTTGTGCGTCCTTAACACACACGCAGTCGCGCACTA
Internal bar code:GTTTCATCGAGACGTTTTTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2467
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTTTGCTTGCATGCGAT
Suggested primer 2:CACCACCACTCGGAATGTGA