Insertion junction: CLIP2.030722_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030722
Chromosome:chromosome 12
Location:3076304
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g501200 SKP1,ROC80 E3 ubiquitin ligase; (1 of 1) K03094 - S-phase kinase-associated protein 1 (SKP1, CBF3D) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGGCACGTTTGCATCTCTGACACGCTGCTCCCTTGTCTGCGACGCACC
Internal bar code:ATCCTCGGTAGCTCTGGTTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1312
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGGTGATACAGCTGCAA
Suggested primer 2:GAAGAAGGGTGCTGACGACA