Insertion junction: CLIP2.030730_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.030730
Chromosome:chromosome 17
Location:3567977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724950 (1 of 1) PTHR16161:SF0 - TRANSCRIPTIONAL PROTEIN SWT1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTCGAGCGCGGCCGCGGCCGGCCCCGCCGAGAGCTGAAGCATCTGGAG
Internal bar code:GTGTATATATATCTGGAGTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:6593
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CATATTTTGCGGCATGCCCA
Suggested primer 2:GCTGGTCAAGTGAGTCGTGA