Insertion junction: CLIP2.030730_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030730
Chromosome:chromosome 17
Location:3567984
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724950 (1 of 1) PTHR16161:SF0 - TRANSCRIPTIONAL PROTEIN SWT1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGCACCAGCGATGGACAGCACAGTACCACGGAGCCGTCTTTGACCAG
Internal bar code:GTTTATTGGGAATATGTGACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:6524
LEAP-Seq percent confirming:91.1111
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGTCAAGTGAGTCGTGA
Suggested primer 2:CATATTTTGCGGCATGCCCA