Insertion junction: CLIP2.030736_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030736
Chromosome:chromosome 11
Location:1679659
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g468353 (1 of 2) PTHR11537//PTHR11537:SF14 - VOLTAGE-GATED POTASSIUM CHANNEL // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGTGAGAGGGAGGTGAGTTTAGGGGGGTAAGGGAACAAGCGGGCGGA
Internal bar code:TCGACCCAAAGGGCCAACCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:804
LEAP-Seq percent confirming:61.1111
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGGGGATGTAGCCGTTCA
Suggested primer 2:GTTGGGCTCGACTTGGTACA