Insertion junction: CLIP2.030746_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030746
Chromosome:chromosome 16
Location:1657599
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654550 (1 of 5) 1.14.11.27 - [Histone H3]-lysine-36 demethylase / JmjC domain-containing histone demethylase 1A intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCGTAGAGCTAAAACGCCGAGGGCGATGCTCAGGGGTGCGGTCAGGA
Internal bar code:ACCCATTCTTCTGGCTAAAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1541
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTCTTGTCGCCCATCAC
Suggested primer 2:AGCGTCGACCACAAGCATAA