Insertion junction: CLIP2.030746_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030746
Chromosome:chromosome 16
Location:1657600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654550 (1 of 5) 1.14.11.27 - [Histone H3]-lysine-36 demethylase / JmjC domain-containing histone demethylase 1A intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCCAAGAATCCCACACACGTCAGTGCACCCGGAGTCCTGCAAGCTGG
Internal bar code:ACCCATTCTTCTGGCTAAAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4380
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGTCGACCACAAGCATAA
Suggested primer 2:TCCTTCTTGTCGCCCATCAC