Insertion junction: CLIP2.030747_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030747
Chromosome:chromosome 13
Location:3181011
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g585100 (1 of 2) IPR002014//IPR008942 - VHS domain // ENTH/VHS intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGTCGGGAGCGGAGAGCAGGCAGGCACGTGCACCCGTGCGGGTCCGG
Internal bar code:CTCGTTTTTTGGGTGAAAAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2186
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGAAAGGCCACTCACCGA
Suggested primer 2:TAAAACCCAATCCGGAGCCC