Insertion junction: CLIP2.030749_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030749
Chromosome:chromosome 7
Location:5145047
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g348450 (1 of 18) K13412 - calcium-dependent protein kinase (CPK) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAAAATGCCCTCGACACCATGCATTGTTTATCATAATGAAGCGCCCCT
Internal bar code:GCGGTCGTTGGTGACTGGACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2083
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGAAAACGCTGCCGAAAG
Suggested primer 2:ACGCCAGCTACGTAATACCG