Insertion junction: CLIP2.030763_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.030763
Chromosome:chromosome 12
Location:5579144
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531000 AMT1H,AMT8 Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGGAGCGCACCAGCCTGGTGGCCTACCCCGTGTTCACGGTGCTCATG
Internal bar code:ATATTGCGTGTATACTGACCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:733
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AACCACAGGAAGCTGCAAGT
Suggested primer 2:ATACGGCCGCTCTAAGAACG