Insertion junction: CLIP2.030766_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.030766
Chromosome:chromosome 17
Location:4226907
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g729500 (1 of 1) PTHR22870//PTHR22870:SF136 - REGULATOR OF CHROMOSOME CONDENSATION // ALSIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGTAACCACGGCAGCGCCGACGGCACGCCGCGGTCAATACAGCCGCA
Internal bar code:GGTAAAAATGTCTGGAAGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1550
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCAACTATGCATGCTGGA
Suggested primer 2:GAGGGTGTAGCCGTCGTATG