Insertion junction: CLIP2.030784_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030784
Chromosome:chromosome 3
Location:3909293
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170850 MMP19 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATAGGAATAAGGCAAATGAACACGCACTCAAACAGCTCACACATGTCG
Internal bar code:AGAATGTCATATTAAGGCCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:312
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCGTACAGTCACGTGGG
Suggested primer 2:TTATGAGGTGCGAGCGGATC