Insertion junction: CLIP2.030784_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030784
Chromosome:chromosome 3
Location:3909294
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170850 MMP19 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGACCCAATTTGTTGGGCTCCGGAAAGTAATCCCTACCCGCCTTTCCTC
Internal bar code:GTCGGCGACGATGGCATCCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2773
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TTATGAGGTGCGAGCGGATC
Suggested primer 2:TGTTCGTACAGTCACGTGGG